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MCAT
Course: MCAT > Unit 5
Lesson 12: Overview of metabolism- Overview of metabolism questions
- Overview of metabolism: Anabolism and catabolism
- ATP: Adenosine triphosphate
- ATP hydrolysis: Gibbs free energy
- ATP hydrolysis: Transfer of a phosphate group
- Oxidation and reduction review from biological point-of-view
- Oxidation and reduction in metabolism
- Electron carrier molecules
- ATP hydrolysis mechanism
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Oxidation and reduction in metabolism
How is metabolism similar to a galvanic cell? Apply fundamental principles of electrochemistry to understand the energy harnessed from the oxidation-reduction processes of metabolism. Created by Jasmine Rana.
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- At, can we say that the ratio of C:O 1:2 in CO2 allows us to imagine that the carbon from glucose has been oxidised? 5:50
I feel like this is a pretty tricky concept to accept point blank. Could anyone explain that a bit further?(5 votes)- Anytime carbon becomes bonded to an electronegative atom like nitrogen, oxygen, or sulfur, the carbon becomes more oxidized. The oxygen is stealing the electrons from carbon. We could say that fluorine is more electronegative than oxygen, but F does not exist in biochemistry to an significant extent. As the ratio of carbon to oxygen decreases, the more stable, low energy the molecule becomes. Therefore, due to stability, no further free energy can be siphoned off of CO2. This is why CO2 is considered a waste product and is usually exhaled in mammals. The main goal of catabolism is to oxidize carbon. Oxidizing carbon removes energy from it to fuel other processes by producing NADH, NADPH, FADH2 and FMN, reduced coenzymes. By the time CO2 is produced in mammals, it has been completely depleted of energy. It can be used in some biosynthetic reactions and few alternate catabolic reactions, but in biochemistry, CO2 is the most oxidized carbon molecule, since F does not exist.(14 votes)
- in the equation about cellular respiration, can we say that glucose is being oxidized because it loses hydrogen? and that oxygen is reduced because it is gaining hydrogens? thanks!(2 votes)
- Using the biological definition of oxidation and reduction you can say that glucose is being oxidized and O2 is being reduced. You can also see that the charge on the O2 is neutral (0) before it was reduced and when it is converted to water, the charge on the oxygen is now -2, as it gained electrons (reduction). Similarly, the carbon in the glucose before oxidation was neutral (0), but after it was oxidized to CO2, the charge on the carbon is now +4, as it lost electrons (oxidation).(2 votes)
- Great analogy comparing the wire to the E.T.C. This video really made things clear. Thanks so much!(1 vote)
- I am a bit rusty on the stoichiometry of the cellular respiration rxn. I cannot see where the Oxygen and Hydrogen are going and how the reactant side is equal in atoms to the product side. Can someone explain this to me?(1 vote)
- Conservation of mass: mass is neither created nor destroyed. We describe mass of atoms in terms of grams and moles. So, when the reactants have a certain number of mass, the products must turn out to have the same mass. We call this "balancing" the chemical equation or "stoichiometry." Stoichiometry is really the principle of balancing the equations so that they have the same mass when you perform a chemical reaction, whether it be grams, moles, or whatever convention we use to describe that the mass is conserved. To prove this, count the total number of hydrogens, carbons, and oxygens (in moles) on the reactants side and compare it with the total number of hydrogens, carbons, and oxygens on the products side and you will see that they are the same.(1 vote)
- This is a great video but anyone else not really able to concentrate with that voice?(1 vote)
- This video is amazing, any chance of uploading a hi Res version? It'd be great for both the mind and the eyes.(1 vote)
- Are there any videos specific to electrochemistry?(0 votes)
Video transcript
I really want to go ahead and
integrate some of the topics that you've learned
in general chemistry with topics in metabolism. Specifically, from a general
chemistry perspective, I want to review
electrochemistry. And then I'm going to connect
it to one of the biggest topics in metabolism-- the
breakdown of glucose in a process called
cellular respiration. And if you recall,
cellular respiration describes the
body's way of being able to efficiently
produce the energy currency of the
cell, which is ATP. Now admittedly, this is kind
of an unconventional way to first present the topic
of cellular respiration. But what I think is really neat
and what I think you'll realize is that we're really killing
two birds with one stone here. Because if you understand the
concepts of electrochemistry, you also understand cellular
respiration and vice versa. So let's go ahead
and get started by returning to the
topic of electrochemistry from general chemistry class. And let's go ahead and review a
simple oxidation and reduction reaction between solid
zinc and copper ions floating around in solutions. So the aq just stands
for aqueous solution. And the products
of this reaction are zinc ion and solid copper. Remember that whenever we're
talking about reduction oxidation reactions,
or as they're fondly referred to as to
redox reactions, we're talking about
the flow of electrons. We must ask the question,
what is gaining electrons and what's losing electrons? So copper here, which
is positively charged, is gaining electrons
and therefore being turned into solid
copper, which has no charge. So we say it's
gaining electrons, which means it's being reduced. On the other hand, solid zinc is
turning into a positive charge. So it's losing negative charge. So we say here that
it's losing electrons. It's being oxidized. And another way to really see
this simultaneous gain and loss of electrons is to
note here that there is a flow of electrons
from the zinc, which is losing electrons, to
the copper ions, which are then reduced
to solid copper. And this, of course, is where
electrochemistry comes in, because electrochemistry
allows us to isolate this
flow of electrons by building what is called
an electrochemical cell. So let's go ahead and build
a electrochemical cell for this particular
reduction oxidation reaction. So I'm going to go ahead and
draw two containers, which, if you recall, are
referred to as half cells, because they're each half of
the entire electrochemical cell. And remember that they're
connected to one another through a wire that we can
isolate the flow of electrons. And there's also
another component called a salt bridge, which
connects these two half cells. Just as a brief review,
remember that this allows the flow of
ions between each cell so that there's not
a buildup of charge from this movement of electrons. Now, let's go ahead
and remind ourselves where these electrons
are coming from. So remember, the electrons are
flowing from the zinc, which is losing electrons,
to the copper, which is gaining electrons. And this is really
the ingenious part of the electrochemical cell. It allows us to separate
what's losing electrons-- in this case, solid zinc-- from
what's gaining electrons, which is the copper
ions, and therefore allows us to isolate this flow
of electrons through a wire. And of course, we
also have zinc ions in solution on this side of
the cell and solid copper. The take-home message
is we're really separating what's
getting oxidized from what's getting reduced. And ultimately, this
flow of electrons through the wire, which is
also referred to as current, allows us to perform
energy requiring processes such as in lighting
up a light bulb. Now, here's the
most important point that I want to
make in this video. In our body, we also
isolate a flow of electrons during cellular respiration. But instead of lighting
up a light bulb, we harness this
flow of electrons to produce chemical
energy in the form of ATP. So let's go ahead
and take a look at how this works by looking
at the overall reaction for cellular respiration. Specifically here, we're looking
at the breakdown of glucose. So glucose is the
chemical formula of 6 carbons, 12
hydrogens, and 6 oxygens. And even though it's broken
down in many multiple steps, the overall reaction for
the breakdown of glucose is glucose combining with oxygen
to produce water and carbon dioxide. And I'm going to go ahead and
put in our stoichiometry here. This overall reaction is also
a reduction oxidation process that involves a
flow of electrons, just like our zinc
and copper example. The flow of electrons however
may not be as clear here. So I just want to take a
minute and review the oxidation and reduction from more of
a biological perspective, by looking at this reaction. So in the zinc and
copper example, it was clear what was gaining
and losing negative charge. But here, we have to really
think about electron density. And so when we look at
this molecule of glucose, it is oxidized-- that
is, it loses electron density to form carbon dioxide. And the way we can
rationalize it-- so I'm going to go ahead and
say that this is oxidized. If we look at the
carbon, when it's attached to two atoms of oxygen,
the oxygen atoms essentially steal the show, because they
are much more electronegative than the carbon. So carbon has very
little electron density. It lost a lot of it
from before, when it was surrounded by
hydrogens as well, which didn't steal the
electrons as much. Now remember, if
something's being oxidized, something must be reduced. In this case, our
oxygen molecule, which is also referred to as
the final electronic acceptor, is being reduced. It's gaining electron density. It's essentially gaining the
electrons and the hydrogens that were lost from
our glucose molecule. So here, we have a gain of
hydrogen, and we form water. So the water is the reduced
product of the oxygen. Now once again, we can
summarize this flow of electrons by saying that the electrons
flow from the glucose to the oxygen. So with this written
out, I really want to go back to our
electrochemical cell up here and point out that
the solid zinc is really analogous to our glucose,
because both of these are losing electrons. And the copper ion here is
really analogous to our oxygen, because both of these
are getting reduced. So I'm actually going
to go ahead and erase the zinc and the
copper and replace it with the glucose and the
oxygen to essentially show you that there's an analogy here
between the electrochemical cell and cellular respiration. Now clearly, I'm not being very
technical about the creation of this electrochemical
cell, mostly because, as you can
guess, this really isn't what's
happening in our body. But it's really this
flow of electrons that our body harnesses. And instead of lighting
up a light bulb here, which I'm going to
erase here, our body uses this flow of electrons. It harnesses it to allow
the body to convert ADP back into ATP, which is, of
course, the entire goal of cellular respiration. And ATP can fuel all of the
energy-requiring processes in our body. We can continue to
extend this analogy between cellular respiration
and the electrochemical cell we've drawn by pointing out
that even though we don't have a wire or separate
containers in our body, it turns out that our body has
actually functional equivalents of both of these two things. So let's start off with a wire. So in our body,
instead of a wire, we have something called the
electron transport chain, which I'm going to
abbreviate here as ETC. And this electron
transport chain contains an array of proteins
that readily accept and lose electrons. Now when it comes to
having a functional equivalent for having
separate containers, our body is able
to compartmentalize many of the reactions involved
in cellular respiration. And specifically, I
want to point out, you'll run into the fact
that cellular respiration, in its final step,
which is called oxidated phosphorylation,
occurs in the mitochondria. So I'm going to just
draw an organelle that looks like a mitochondria. And the mitochondria
has two kind of spaces, because it has two membranes. It has the inside space as
well as the outside space. And by having the
oxidation and reduction reactions of
cellular respiration occurring at
different locations, at the interface
between these two spaces and regulated by
different proteins, allows the body to efficiently
isolate the flow of electrons. So to summarize and to
make one final point, I want to reiterate that
glucose is broken down in a series of step. And along the way,
when it's oxidized, it forms various
metabolites or bi-products that are more and more oxidized. And these metabolites
essentially donate electrons at
each step to molecules that are referred to as
electron carrier molecules. And as a technicality,
I want to point out that it's really these
electron carrier molecules that ultimately donate electrons to
the electron transport chain and ultimately to oxygens. So I'm going to go ahead and
indicate this with an asterisk here and note that it's
really the electron carrier molecules which directly donate
electrons into this circuit.